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mRNA : PDH-E1 ALPHA A. thaliana

DB identifier  AT1G01090.1
Name  pyruvate dehydrogenase E1 alpha
Confidence Class  ? 2
Confidence Rating  ? ****
Curator Summary  ? pyruvate dehydrogenase E1 alpha subunit  Source: TAIR, Jun 30, 2015.
Computational Description  ? pyruvate dehydrogenase E1 alpha (PDH-E1 ALPHA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: oxidation reduction, glycolysis, metabolic process; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase complex E1 alpha subunit (TAIR:AT1G59900.1).  Source: TAIR, Jun 30, 2015.
Brief Description  pyruvate dehydrogenase E1 alpha  Source: Araport11 (06/2016).
Secondary Identifier  gene:2200979

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0 Synonyms


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1 Five Prime UT Rs

DB identifier Length Chromosome Location
AT1G01090:five_prime_UTR:1 138   Chr1: 49167-49304

1 Gene

Gene ID Symbol Brief Description Is Obsolete?
AT1G01090 PDH-E1 ALPHA pyruvate dehydrogenase E1 alpha false

1 Three Prime UT Rs

DB identifier Length Chromosome Location
AT1G01090:three_prime_UTR:1 471   Chr1: 47234-47704


RNA-seq Expression



3 Data Sets

Name Description Version
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015

2 Ontology Annotations

Subject . Primary Identifier

Subject . Symbol

Ontology Term . Identifier

Ontology Term . Name
AT1G01090.1 PDH-E1 ALPHA PO:0009001 fruit
AT1G01090.1 PDH-E1 ALPHA PO:0009025 vascular leaf

1 Protein

DB identifier Length Molecular Weight
ODPA3_ARATH 428   47174