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Gene : UTR3 A. thaliana

Gene ID  ? AT1G14360
Brief Description  UDP-galactose transporter 3  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? UDP-galactose transporter 3 (UTR3); FUNCTIONS IN: pyrimidine nucleotide sugar transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 1 (TAIR:AT2G02810.1).  Source: TAIR, Jun 30, 2015.
Name  ? UDP-galactose transporter 3
  • synonyms:
  • ATUTR3

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1 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Annotation PubMed Id
Biochemical analysis in both AtUTr1 and AtUTr3 mutants indicates that uptake of UDP-glucose into the endoplasmic reticulum is mostly driven by these two transporters. 19906043

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT1G14360 0.5kb upstream 0.5kb upstream 2575   true Chr1: 4911093-4913667
AT1G14360 0.5kb upstream 0.5kb upstream 500   false Chr1: 4913168-4913667
AT1G14360 0.5kb downstream 0.5kb downstream 2575   true Chr1: 4910593-4913167
AT1G14360 0.5kb downstream 0.5kb downstream 500   false Chr1: 4910593-4911092
AT1G14360 1.0kb upstream 1.0kb upstream 3075   true Chr1: 4911093-4914167
AT1G14360 1.0kb upstream 1.0kb upstream 1000   false Chr1: 4913168-4914167
AT1G14360 1.0kb downstream 1.0kb downstream 3075   true Chr1: 4910093-4913167
AT1G14360 1.0kb downstream 1.0kb downstream 1000   false Chr1: 4910093-4911092
AT1G14360 3.0kb upstream 3.0kb upstream 5075   true Chr1: 4911093-4916167
AT1G14360 3.0kb upstream 3.0kb upstream 3000   false Chr1: 4913168-4916167
AT1G14360 3.0kb downstream 3.0kb downstream 5075   true Chr1: 4908093-4913167
AT1G14360 3.0kb downstream 3.0kb downstream 3000   false Chr1: 4908093-4911092

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0 Pathways

Data Source: KEGG

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Expression

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Interactions

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11 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from GOC GO annotations assigned by the GO Consortium 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
GeneRIF Concise phrase describing gene function and publication associated with NCBI Gene records 8/12/2016
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139