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Gene : APK2A A. thaliana

Gene ID  ? AT1G14370
Brief Description  protein kinase 2A  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? protein kinase 2A (APK2A); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2B (TAIR:AT2G02800.2).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes protein kinase APK2a. Protein is N-myristoylated.  Source: TAIR, Jun 30, 2015.
Name  ? protein kinase 2A
  • synonyms:
  • Kin1,
  • PBL2,
  • PBS1-like 2,
  • kinase 1

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1 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Annotation PubMed Id
xopAC-triggered immunity against Xanthomonas depends on Arabidopsis receptor-like cytoplasmic kinase genes PBL2 and RIPK. 23951354


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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT1G14370 0.5kb upstream 0.5kb upstream 3148   true Chr1: 4914991-4918138
AT1G14370 0.5kb upstream 0.5kb upstream 500   false Chr1: 4914991-4915490
AT1G14370 0.5kb downstream 0.5kb downstream 3148   true Chr1: 4915491-4918638
AT1G14370 0.5kb downstream 0.5kb downstream 500   false Chr1: 4918139-4918638
AT1G14370 1.0kb upstream 1.0kb upstream 3648   true Chr1: 4914491-4918138
AT1G14370 1.0kb upstream 1.0kb upstream 1000   false Chr1: 4914491-4915490
AT1G14370 1.0kb downstream 1.0kb downstream 3648   true Chr1: 4915491-4919138
AT1G14370 1.0kb downstream 1.0kb downstream 1000   false Chr1: 4918139-4919138
AT1G14370 3.0kb upstream 3.0kb upstream 5648   true Chr1: 4912491-4918138
AT1G14370 3.0kb upstream 3.0kb upstream 3000   false Chr1: 4912491-4915490
AT1G14370 3.0kb downstream 3.0kb downstream 5648   true Chr1: 4915491-4921138
AT1G14370 3.0kb downstream 3.0kb downstream 3000   false Chr1: 4918139-4921138


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0 Pathways

Data Source: KEGG

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10 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
GeneRIF Concise phrase describing gene function and publication associated with NCBI Gene records 8/12/2016
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016