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Gene : AT1G26130 A. thaliana

Gene ID  ? AT1G26130
Brief Description  ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT1G26130 0.5kb upstream 0.5kb upstream 6584   true Chr1: 9032516-9039099
AT1G26130 0.5kb upstream 0.5kb upstream 500   false Chr1: 9032516-9033015
AT1G26130 0.5kb downstream 0.5kb downstream 6584   true Chr1: 9033016-9039599
AT1G26130 0.5kb downstream 0.5kb downstream 500   false Chr1: 9039100-9039599
AT1G26130 1.0kb upstream 1.0kb upstream 7084   true Chr1: 9032016-9039099
AT1G26130 1.0kb upstream 1.0kb upstream 1000   false Chr1: 9032016-9033015
AT1G26130 1.0kb downstream 1.0kb downstream 7084   true Chr1: 9033016-9040099
AT1G26130 1.0kb downstream 1.0kb downstream 1000   false Chr1: 9039100-9040099
AT1G26130 3.0kb upstream 3.0kb upstream 9084   true Chr1: 9030016-9039099
AT1G26130 3.0kb upstream 3.0kb upstream 3000   false Chr1: 9030016-9033015
AT1G26130 3.0kb downstream 3.0kb downstream 9084   true Chr1: 9033016-9042099
AT1G26130 3.0kb downstream 3.0kb downstream 3000   false Chr1: 9039100-9042099

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from InterPro    
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0