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Gene : AT1G26690 A. thaliana

Gene ID  ? AT1G26690
Brief Description  emp24/gp25L/p24 family/GOLD family protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G69460.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT1G26690 0.5kb upstream 0.5kb upstream 2234   true Chr1: 9224059-9226292
AT1G26690 0.5kb upstream 0.5kb upstream 500   false Chr1: 9225793-9226292
AT1G26690 0.5kb downstream 0.5kb downstream 2234   true Chr1: 9223559-9225792
AT1G26690 0.5kb downstream 0.5kb downstream 500   false Chr1: 9223559-9224058
AT1G26690 1.0kb upstream 1.0kb upstream 2734   true Chr1: 9224059-9226792
AT1G26690 1.0kb upstream 1.0kb upstream 1000   false Chr1: 9225793-9226792
AT1G26690 1.0kb downstream 1.0kb downstream 2734   true Chr1: 9223059-9225792
AT1G26690 1.0kb downstream 1.0kb downstream 1000   false Chr1: 9223059-9224058
AT1G26690 3.0kb upstream 3.0kb upstream 4734   true Chr1: 9224059-9228792
AT1G26690 3.0kb upstream 3.0kb upstream 3000   false Chr1: 9225793-9228792
AT1G26690 3.0kb downstream 3.0kb downstream 4734   true Chr1: 9221059-9225792
AT1G26690 3.0kb downstream 3.0kb downstream 3000   false Chr1: 9221059-9224058

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0 Pathways

Data Source: KEGG

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Expression

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0