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Gene : RL6 A. thaliana

Gene ID  ? AT1G75250
Brief Description  RAD-like 6  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1).  Source: TAIR, Jun 30, 2015.
Name  ? RAD-like 6
  • synonyms:
  • RAD-like 6,
  • RSM3,
  • ATRL6,
  • RADIALIS-LIKE SANT/MYB 3

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT1G75250 0.5kb upstream 0.5kb upstream 1765   true Chr1: 28244317-28246081
AT1G75250 0.5kb upstream 0.5kb upstream 500   false Chr1: 28245582-28246081
AT1G75250 0.5kb downstream 0.5kb downstream 1765   true Chr1: 28243817-28245581
AT1G75250 0.5kb downstream 0.5kb downstream 500   false Chr1: 28243817-28244316
AT1G75250 1.0kb upstream 1.0kb upstream 2265   true Chr1: 28244317-28246581
AT1G75250 1.0kb upstream 1.0kb upstream 1000   false Chr1: 28245582-28246581
AT1G75250 1.0kb downstream 1.0kb downstream 2265   true Chr1: 28243317-28245581
AT1G75250 1.0kb downstream 1.0kb downstream 1000   false Chr1: 28243317-28244316
AT1G75250 3.0kb upstream 3.0kb upstream 4265   true Chr1: 28244317-28248581
AT1G75250 3.0kb upstream 3.0kb upstream 3000   false Chr1: 28245582-28248581
AT1G75250 3.0kb downstream 3.0kb downstream 4265   true Chr1: 28241317-28245581
AT1G75250 3.0kb downstream 3.0kb downstream 3000   false Chr1: 28241317-28244316

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from InterPro    
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139