help  | faq  | software  | ARAPORT

Gene : AGL44 A. thaliana

Gene ID  ? AT2G14210
Brief Description  AGAMOUS-like 44  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? AGAMOUS-like 44 (AGL44); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to nutrient, lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? MADS box gene, transcription factor  Source: TAIR, Jun 30, 2015.
Name  ? AGAMOUS-like 44
  • synonyms:
  • ANR1

Locus History Displayer

Publication Counts Displayer

3 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Annotation PubMed Id
ANR1 expression in roots of hydroponically grown Arabidopsis plants was specifically regulated by changes in the N supply, being induced by N deprivation and rapidly repressed by N re-supply. 16021502
There is evidence for a nitrate-dependent component of the ANR1 signalling pathway. 16339770
ANR1 overexpression accelerates early seedling development. 22523192


Sequence Feature Displayer

Gene Structure Displayer

J Browse Displayer

Overlapping Features Displayer

12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G14210 0.5kb upstream 0.5kb upstream 5806   true Chr2: 6018058-6023863
AT2G14210 0.5kb upstream 0.5kb upstream 500   false Chr2: 6018058-6018557
AT2G14210 0.5kb downstream 0.5kb downstream 5806   true Chr2: 6018558-6024363
AT2G14210 0.5kb downstream 0.5kb downstream 500   false Chr2: 6023864-6024363
AT2G14210 1.0kb upstream 1.0kb upstream 6306   true Chr2: 6017558-6023863
AT2G14210 1.0kb upstream 1.0kb upstream 1000   false Chr2: 6017558-6018557
AT2G14210 1.0kb downstream 1.0kb downstream 6306   true Chr2: 6018558-6024863
AT2G14210 1.0kb downstream 1.0kb downstream 1000   false Chr2: 6023864-6024863
AT2G14210 3.0kb upstream 3.0kb upstream 8306   true Chr2: 6015558-6023863
AT2G14210 3.0kb upstream 3.0kb upstream 3000   false Chr2: 6015558-6018557
AT2G14210 3.0kb downstream 3.0kb downstream 8306   true Chr2: 6018558-6026863
AT2G14210 3.0kb downstream 3.0kb downstream 3000   false Chr2: 6023864-6026863


Protein Displayer


Gene Ontology Displayer

0 Pathways

Data Source: KEGG

Gene --> Ontology term

Gene --> Pathways


Plant Ontology Displayer

Bar Efp Browser Displayer

Array Expression

RNA-seq Expression


Save / Export






Cytoscape Network Displayer


Homologue Displayer

Phytomine Ortholog Displayer


Alelle Table Displayer

Stock Gene Table Displayer



11 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
GeneRIF Concise phrase describing gene function and publication associated with NCBI Gene records 8/12/2016
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139