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Gene : ABCG33 A. thaliana

Gene ID  ? AT2G37280
Brief Description  pleiotropic drug resistance 5  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? pleiotropic drug resistance 5 (PDR5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 9 (TAIR:AT3G53480.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem.  Source: TAIR, Jun 30, 2015.
Name  ? ATP-binding cassette G33
  • synonyms:
  • PDR5,
  • PLEIOTROPIC DRUG RESISTANCE 5,
  • pleiotropic drug resistance 5,
  • ATPDR5

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G37280 0.5kb upstream 0.5kb upstream 6989   true Chr2: 15649669-15656657
AT2G37280 0.5kb upstream 0.5kb upstream 500   false Chr2: 15649669-15650168
AT2G37280 0.5kb downstream 0.5kb downstream 6989   true Chr2: 15650169-15657157
AT2G37280 0.5kb downstream 0.5kb downstream 500   false Chr2: 15656658-15657157
AT2G37280 1.0kb upstream 1.0kb upstream 7489   true Chr2: 15649169-15656657
AT2G37280 1.0kb upstream 1.0kb upstream 1000   false Chr2: 15649169-15650168
AT2G37280 1.0kb downstream 1.0kb downstream 7489   true Chr2: 15650169-15657657
AT2G37280 1.0kb downstream 1.0kb downstream 1000   false Chr2: 15656658-15657657
AT2G37280 3.0kb upstream 3.0kb upstream 9489   true Chr2: 15647169-15656657
AT2G37280 3.0kb upstream 3.0kb upstream 3000   false Chr2: 15647169-15650168
AT2G37280 3.0kb downstream 3.0kb downstream 9489   true Chr2: 15650169-15659657
AT2G37280 3.0kb downstream 3.0kb downstream 3000   false Chr2: 15656658-15659657

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0