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Gene : ATMAK3 A. thaliana

Gene ID  ? AT2G38130
Brief Description  Acyl-CoA N-acyltransferases (NAT) superfamily protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? ATMAK3; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G13780.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes the Arabidopsis homolog of the yeast protein MAK3, a component of the N-terminal acetyltransferase complex C. In mutant plants, synthesis of plastome-encoded photosystem II core proteins D1 and CP47 is affected resulting in fewer thylakoid multiprotein complexes.  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI


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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G38130 0.5kb upstream 0.5kb upstream 2887   true Chr2: 15978377-15981263
AT2G38130 0.5kb upstream 0.5kb upstream 500   false Chr2: 15980764-15981263
AT2G38130 0.5kb downstream 0.5kb downstream 2887   true Chr2: 15977877-15980763
AT2G38130 0.5kb downstream 0.5kb downstream 500   false Chr2: 15977877-15978376
AT2G38130 1.0kb upstream 1.0kb upstream 3387   true Chr2: 15978377-15981763
AT2G38130 1.0kb upstream 1.0kb upstream 1000   false Chr2: 15980764-15981763
AT2G38130 1.0kb downstream 1.0kb downstream 3387   true Chr2: 15977377-15980763
AT2G38130 1.0kb downstream 1.0kb downstream 1000   false Chr2: 15977377-15978376
AT2G38130 3.0kb upstream 3.0kb upstream 5387   true Chr2: 15978377-15983763
AT2G38130 3.0kb upstream 3.0kb upstream 3000   false Chr2: 15980764-15983763
AT2G38130 3.0kb downstream 3.0kb downstream 5387   true Chr2: 15975377-15980763
AT2G38130 3.0kb downstream 3.0kb downstream 3000   false Chr2: 15975377-15978376


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Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0