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Gene : CDKB1;2 A. thaliana

Gene ID  ? AT2G38620
Brief Description  cyclin-dependent kinase B1;2  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? cyclin-dependent kinase B1;2 (CDKB1;2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;1 (TAIR:AT3G54180.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes a member of a plant specific family of cyclin dependent kinases.  Source: TAIR, Jun 30, 2015.
Name  ? cyclin-dependent kinase B1;2

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI


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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G38620 0.5kb upstream 0.5kb upstream 2114   true Chr2: 16151973-16154086
AT2G38620 0.5kb upstream 0.5kb upstream 500   false Chr2: 16151973-16152472
AT2G38620 0.5kb downstream 0.5kb downstream 2114   true Chr2: 16152473-16154586
AT2G38620 0.5kb downstream 0.5kb downstream 500   false Chr2: 16154087-16154586
AT2G38620 1.0kb upstream 1.0kb upstream 2614   true Chr2: 16151473-16154086
AT2G38620 1.0kb upstream 1.0kb upstream 1000   false Chr2: 16151473-16152472
AT2G38620 1.0kb downstream 1.0kb downstream 2614   true Chr2: 16152473-16155086
AT2G38620 1.0kb downstream 1.0kb downstream 1000   false Chr2: 16154087-16155086
AT2G38620 3.0kb upstream 3.0kb upstream 4614   true Chr2: 16149473-16154086
AT2G38620 3.0kb upstream 3.0kb upstream 3000   false Chr2: 16149473-16152472
AT2G38620 3.0kb downstream 3.0kb downstream 4614   true Chr2: 16152473-16157086
AT2G38620 3.0kb downstream 3.0kb downstream 3000   false Chr2: 16154087-16157086


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0 Pathways

Data Source: KEGG

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10 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139