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Gene : ANNAT3 A. thaliana

Gene ID  ? AT2G38760
Brief Description  annexin 3  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? annexin 3 (ANNAT3); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: vacuole, cell surface; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464); BEST Arabidopsis thaliana protein match is: annexin 8 (TAIR:AT5G12380.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2 increases, they relocate to the plasma membrane.  Source: TAIR, Jun 30, 2015.
Name  ? annexin 3
  • synonyms:
  • ANNEXIN 3,
  • ANN3,
  • AtANN3

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI


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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G38760 0.5kb upstream 0.5kb upstream 2226   true Chr2: 16200444-16202669
AT2G38760 0.5kb upstream 0.5kb upstream 500   false Chr2: 16200444-16200943
AT2G38760 0.5kb downstream 0.5kb downstream 2226   true Chr2: 16200944-16203169
AT2G38760 0.5kb downstream 0.5kb downstream 500   false Chr2: 16202670-16203169
AT2G38760 1.0kb upstream 1.0kb upstream 2726   true Chr2: 16199944-16202669
AT2G38760 1.0kb upstream 1.0kb upstream 1000   false Chr2: 16199944-16200943
AT2G38760 1.0kb downstream 1.0kb downstream 2726   true Chr2: 16200944-16203669
AT2G38760 1.0kb downstream 1.0kb downstream 1000   false Chr2: 16202670-16203669
AT2G38760 3.0kb upstream 3.0kb upstream 4726   true Chr2: 16197944-16202669
AT2G38760 3.0kb upstream 3.0kb upstream 3000   false Chr2: 16197944-16200943
AT2G38760 3.0kb downstream 3.0kb downstream 4726   true Chr2: 16200944-16205669
AT2G38760 3.0kb downstream 3.0kb downstream 3000   false Chr2: 16202670-16205669


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0 Pathways

Data Source: KEGG

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9 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from InterPro    
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139