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Gene : AT2G41830 A. thaliana

Gene ID  ? AT2G41830
Brief Description  Uncharacterized protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? Uncharacterized protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT5G21080.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G41830 0.5kb upstream 0.5kb upstream 7522   true Chr2: 17450109-17457630
AT2G41830 0.5kb upstream 0.5kb upstream 500   false Chr2: 17457131-17457630
AT2G41830 0.5kb downstream 0.5kb downstream 7522   true Chr2: 17449609-17457130
AT2G41830 0.5kb downstream 0.5kb downstream 500   false Chr2: 17449609-17450108
AT2G41830 1.0kb upstream 1.0kb upstream 8022   true Chr2: 17450109-17458130
AT2G41830 1.0kb upstream 1.0kb upstream 1000   false Chr2: 17457131-17458130
AT2G41830 1.0kb downstream 1.0kb downstream 8022   true Chr2: 17449109-17457130
AT2G41830 1.0kb downstream 1.0kb downstream 1000   false Chr2: 17449109-17450108
AT2G41830 3.0kb upstream 3.0kb upstream 10022   true Chr2: 17450109-17460130
AT2G41830 3.0kb upstream 3.0kb upstream 3000   false Chr2: 17457131-17460130
AT2G41830 3.0kb downstream 3.0kb downstream 10022   true Chr2: 17447109-17457130
AT2G41830 3.0kb downstream 3.0kb downstream 3000   false Chr2: 17447109-17450108

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0 Pathways

Data Source: KEGG

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Expression

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0