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Gene : MPPBETA A. thaliana

Gene ID  ? AT3G02090
Brief Description  Insulinase (Peptidase family M16) protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT1G51980.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G02090 0.5kb upstream 0.5kb upstream 3875   true Chr3: 365037-368911
AT3G02090 0.5kb upstream 0.5kb upstream 500   false Chr3: 365037-365536
AT3G02090 0.5kb downstream 0.5kb downstream 3875   true Chr3: 365537-369411
AT3G02090 0.5kb downstream 0.5kb downstream 500   false Chr3: 368912-369411
AT3G02090 1.0kb upstream 1.0kb upstream 4375   true Chr3: 364537-368911
AT3G02090 1.0kb upstream 1.0kb upstream 1000   false Chr3: 364537-365536
AT3G02090 1.0kb downstream 1.0kb downstream 4375   true Chr3: 365537-369911
AT3G02090 1.0kb downstream 1.0kb downstream 1000   false Chr3: 368912-369911
AT3G02090 3.0kb upstream 3.0kb upstream 6375   true Chr3: 362537-368911
AT3G02090 3.0kb upstream 3.0kb upstream 3000   false Chr3: 362537-365536
AT3G02090 3.0kb downstream 3.0kb downstream 6375   true Chr3: 365537-371911
AT3G02090 3.0kb downstream 3.0kb downstream 3000   false Chr3: 368912-371911

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0 Pathways

Data Source: KEGG

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10 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from GOC GO annotations assigned by the GO Consortium 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139