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Gene : PUR7 A. thaliana

Gene ID  ? AT3G21110
Brief Description  purin 7  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? purin 7 (PUR7); FUNCTIONS IN: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity; INVOLVED IN: response to auxin stimulus, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAICAR synthetase, conserved site (InterPro:IPR018236), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), SAICAR synthetase (InterPro:IPR001636).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.  Source: TAIR, Jun 30, 2015.
Name  ? purin 7
  • synonyms:
  • PURIN C,
  • ATPURC,
  • PURC

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G21110 0.5kb upstream 0.5kb upstream 3698   true Chr3: 7402477-7406174
AT3G21110 0.5kb upstream 0.5kb upstream 500   false Chr3: 7405675-7406174
AT3G21110 0.5kb downstream 0.5kb downstream 3698   true Chr3: 7401977-7405674
AT3G21110 0.5kb downstream 0.5kb downstream 500   false Chr3: 7401977-7402476
AT3G21110 1.0kb upstream 1.0kb upstream 4198   true Chr3: 7402477-7406674
AT3G21110 1.0kb upstream 1.0kb upstream 1000   false Chr3: 7405675-7406674
AT3G21110 1.0kb downstream 1.0kb downstream 4198   true Chr3: 7401477-7405674
AT3G21110 1.0kb downstream 1.0kb downstream 1000   false Chr3: 7401477-7402476
AT3G21110 3.0kb upstream 3.0kb upstream 6198   true Chr3: 7402477-7408674
AT3G21110 3.0kb upstream 3.0kb upstream 3000   false Chr3: 7405675-7408674
AT3G21110 3.0kb downstream 3.0kb downstream 6198   true Chr3: 7399477-7405674
AT3G21110 3.0kb downstream 3.0kb downstream 3000   false Chr3: 7399477-7402476

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3 Pathways

Data Source: KEGG

Identifier Name
01100 Metabolic pathways
01110 Biosynthesis of secondary metabolites
00230 Purine metabolism

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9 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from GOC GO annotations assigned by the GO Consortium 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
KEGG pathways data set Wiring diagrams of molecular interactions, reactions, and relations 79.0