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Gene : WNK5 A. thaliana

Gene ID  ? AT3G51630
Brief Description  with no lysine (K) kinase 5  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? with no lysine (K) kinase 5 (WNK5); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 4 (TAIR:AT5G58350.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.  Source: TAIR, Jun 30, 2015.
Name  ? with no lysine (K) kinase 5
  • synonyms:
  • ATWNK5,
  • ZIK1

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G51630 0.5kb upstream 0.5kb upstream 3823   true Chr3: 19148371-19152193
AT3G51630 0.5kb upstream 0.5kb upstream 500   false Chr3: 19148371-19148870
AT3G51630 0.5kb downstream 0.5kb downstream 3823   true Chr3: 19148871-19152693
AT3G51630 0.5kb downstream 0.5kb downstream 500   false Chr3: 19152194-19152693
AT3G51630 1.0kb upstream 1.0kb upstream 4323   true Chr3: 19147871-19152193
AT3G51630 1.0kb upstream 1.0kb upstream 1000   false Chr3: 19147871-19148870
AT3G51630 1.0kb downstream 1.0kb downstream 4323   true Chr3: 19148871-19153193
AT3G51630 1.0kb downstream 1.0kb downstream 1000   false Chr3: 19152194-19153193
AT3G51630 3.0kb upstream 3.0kb upstream 6323   true Chr3: 19145871-19152193
AT3G51630 3.0kb upstream 3.0kb upstream 3000   false Chr3: 19145871-19148870
AT3G51630 3.0kb downstream 3.0kb downstream 6323   true Chr3: 19148871-19155193
AT3G51630 3.0kb downstream 3.0kb downstream 3000   false Chr3: 19152194-19155193

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Data Source: KEGG

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10 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from GOC GO annotations assigned by the GO Consortium 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139