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Gene : CPK32 A. thaliana

Gene ID  ? AT3G57530
Brief Description  calcium-dependent protein kinase 32  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? calcium-dependent protein kinase 32 (CPK32); FUNCTIONS IN: protein binding, calcium-dependent protein kinase C activity, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: response to salt stress, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 14 (TAIR:AT2G41860.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro  Source: TAIR, Jun 30, 2015.
Name  ? calcium-dependent protein kinase 32
  • synonyms:
  • ATCPK32,
  • CDPK32

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3 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Annotation PubMed Id
CPK32 is an ABA signaling component that regulates the ABA-responsive gene expression via ABF4. 16299177
CDPK32-GFP caused severe growth depolarization. 19686372
Calcium-activated CPK32 activates CNGC18, further promoting calcium entry during the elevation phase of Ca(2+) oscillations in the polar growth of pollen tub. 24121288

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G57530 0.5kb upstream 0.5kb upstream 3748   true Chr3: 21296457-21300204
AT3G57530 0.5kb upstream 0.5kb upstream 500   false Chr3: 21299705-21300204
AT3G57530 0.5kb downstream 0.5kb downstream 3748   true Chr3: 21295957-21299704
AT3G57530 0.5kb downstream 0.5kb downstream 500   false Chr3: 21295957-21296456
AT3G57530 1.0kb upstream 1.0kb upstream 4248   true Chr3: 21296457-21300704
AT3G57530 1.0kb upstream 1.0kb upstream 1000   false Chr3: 21299705-21300704
AT3G57530 1.0kb downstream 1.0kb downstream 4248   true Chr3: 21295457-21299704
AT3G57530 1.0kb downstream 1.0kb downstream 1000   false Chr3: 21295457-21296456
AT3G57530 3.0kb upstream 3.0kb upstream 6248   true Chr3: 21296457-21302704
AT3G57530 3.0kb upstream 3.0kb upstream 3000   false Chr3: 21299705-21302704
AT3G57530 3.0kb downstream 3.0kb downstream 6248   true Chr3: 21293457-21299704
AT3G57530 3.0kb downstream 3.0kb downstream 3000   false Chr3: 21293457-21296456

Proteins

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1 Pathways

Data Source: KEGG

Identifier Name
04626 Plant-pathogen interaction

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12 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from GOC GO annotations assigned by the GO Consortium 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
KEGG pathways data set Wiring diagrams of molecular interactions, reactions, and relations 79.0
GeneRIF Concise phrase describing gene function and publication associated with NCBI Gene records 8/12/2016
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139