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Gene : AHL18 A. thaliana

Gene ID  ? AT3G60870
Brief Description  AT-hook motif nuclear-localized protein 18  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? AT-hook motif nuclear-localized protein 18 (AHL18); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 22 (TAIR:AT2G45430.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes an AT hook domain containing protein that, when overexpressed, delays flowering.  Source: TAIR, Jun 30, 2015.
Name  ? AT-hook motif nuclear-localized protein 18

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G60870 0.5kb upstream 0.5kb upstream 1943   true Chr3: 22492311-22494253
AT3G60870 0.5kb upstream 0.5kb upstream 500   false Chr3: 22492311-22492810
AT3G60870 0.5kb downstream 0.5kb downstream 1943   true Chr3: 22492811-22494753
AT3G60870 0.5kb downstream 0.5kb downstream 500   false Chr3: 22494254-22494753
AT3G60870 1.0kb upstream 1.0kb upstream 2443   true Chr3: 22491811-22494253
AT3G60870 1.0kb upstream 1.0kb upstream 1000   false Chr3: 22491811-22492810
AT3G60870 1.0kb downstream 1.0kb downstream 2443   true Chr3: 22492811-22495253
AT3G60870 1.0kb downstream 1.0kb downstream 1000   false Chr3: 22494254-22495253
AT3G60870 3.0kb upstream 3.0kb upstream 4443   true Chr3: 22489811-22494253
AT3G60870 3.0kb upstream 3.0kb upstream 3000   false Chr3: 22489811-22492810
AT3G60870 3.0kb downstream 3.0kb downstream 4443   true Chr3: 22492811-22497253
AT3G60870 3.0kb downstream 3.0kb downstream 3000   false Chr3: 22494254-22497253

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Data Source: KEGG

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7 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0