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mRNA : AT3G63540.1 A. thaliana

DB identifier  AT3G63540.1
Confidence Class  ? 4
Confidence Rating  ? ***
Curator Summary  ? Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence.  Source: TAIR, Jun 30, 2015.
Computational Description  ? Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: oxygen evolving complex, extrinsic to membrane; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123).  Source: TAIR, Jun 30, 2015.
Brief Description  thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)  Source: Araport11 (06/2016).
Secondary Identifier  gene:5019474326

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0 Synonyms

Genomics

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1 Five Prime UT Rs

DB identifier Length Chromosome Location
AT3G63540:five_prime_UTR:1 1   Chr3: 23459804-23459804

1 Gene

Gene ID Symbol Brief Description Is Obsolete?
AT3G63540 AT3G63540 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) false

1 Three Prime UT Rs

DB identifier Length Chromosome Location
AT3G63540:three_prime_UTR:1 730   Chr3: 23458642-23459371

Expression

RNA-seq Expression



 

Other

2 Data Sets

Name Description Version
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)

0 Ontology Annotations

0 Protein