help  | faq  | software  | ARAPORT

Gene : SK32 A. thaliana

Gene ID  ? AT4G00720
Brief Description  shaggy-like protein kinase 32  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? shaggy-like protein kinase 32 (SK32); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 13 (TAIR:AT5G14640.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway.  Source: TAIR, Jun 30, 2015.
Name  ? shaggy-like protein kinase 32
  • synonyms:
  • ATSK32,
  • shaggy-like protein kinase 32

Locus History Displayer

Publication Counts Displayer

2 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Annotation PubMed Id
AtSK3-2 plays an important role in the control of cell elongation in flower development. [AtSK3-2] [ATSK32] 17427040
ASKtheta is a novel component of the brassinosteroid signalling cascade, targeting the transcription factors BES1, BZR1 and BEH2. [ASKtheta] 20128883


Sequence Feature Displayer

Gene Structure Displayer

J Browse Displayer

Overlapping Features Displayer

12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G00720 0.5kb upstream 0.5kb upstream 4392   true Chr4: 293588-297979
AT4G00720 0.5kb upstream 0.5kb upstream 500   false Chr4: 297480-297979
AT4G00720 0.5kb downstream 0.5kb downstream 4392   true Chr4: 293088-297479
AT4G00720 0.5kb downstream 0.5kb downstream 500   false Chr4: 293088-293587
AT4G00720 1.0kb upstream 1.0kb upstream 4892   true Chr4: 293588-298479
AT4G00720 1.0kb upstream 1.0kb upstream 1000   false Chr4: 297480-298479
AT4G00720 1.0kb downstream 1.0kb downstream 4892   true Chr4: 292588-297479
AT4G00720 1.0kb downstream 1.0kb downstream 1000   false Chr4: 292588-293587
AT4G00720 3.0kb upstream 3.0kb upstream 6892   true Chr4: 293588-300479
AT4G00720 3.0kb upstream 3.0kb upstream 3000   false Chr4: 297480-300479
AT4G00720 3.0kb downstream 3.0kb downstream 6892   true Chr4: 290588-297479
AT4G00720 3.0kb downstream 3.0kb downstream 3000   false Chr4: 290588-293587


Protein Displayer


Gene Ontology Displayer

0 Pathways

Data Source: KEGG

Gene --> Ontology term

Gene --> Pathways


Plant Ontology Displayer

Bar Efp Browser Displayer

Array Expression

RNA-seq Expression


Save / Export






Cytoscape Network Displayer


Homologue Displayer

Phytomine Ortholog Displayer


Alelle Table Displayer

Stock Gene Table Displayer



11 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
GeneRIF Concise phrase describing gene function and publication associated with NCBI Gene records 8/12/2016
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139