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Gene : GSTF2 A. thaliana

Gene ID  ? AT4G02520
Brief Description  glutathione S-transferase PHI 2  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? glutathione S-transferase PHI 2 (GSTF2); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: phloem, cotyledon, root, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase F3 (TAIR:AT2G02930.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.  Source: TAIR, Jun 30, 2015.
Name  ? glutathione S-transferase PHI 2
  • synonyms:
  • GST2,
  • ATGSTF2,
  • glutathione S-transferase PHI 2,
  • ATPM24.1,
  • ATPM24

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G02520 0.5kb upstream 0.5kb upstream 2191   true Chr4: 1110343-1112533
AT4G02520 0.5kb upstream 0.5kb upstream 500   false Chr4: 1112034-1112533
AT4G02520 0.5kb downstream 0.5kb downstream 2191   true Chr4: 1109843-1112033
AT4G02520 0.5kb downstream 0.5kb downstream 500   false Chr4: 1109843-1110342
AT4G02520 1.0kb upstream 1.0kb upstream 2691   true Chr4: 1110343-1113033
AT4G02520 1.0kb upstream 1.0kb upstream 1000   false Chr4: 1112034-1113033
AT4G02520 1.0kb downstream 1.0kb downstream 2691   true Chr4: 1109343-1112033
AT4G02520 1.0kb downstream 1.0kb downstream 1000   false Chr4: 1109343-1110342
AT4G02520 3.0kb upstream 3.0kb upstream 4691   true Chr4: 1110343-1115033
AT4G02520 3.0kb upstream 3.0kb upstream 3000   false Chr4: 1112034-1115033
AT4G02520 3.0kb downstream 3.0kb downstream 4691   true Chr4: 1107343-1112033
AT4G02520 3.0kb downstream 3.0kb downstream 3000   false Chr4: 1107343-1110342

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1 Pathways

Data Source: KEGG

Identifier Name
00480 Glutathione metabolism

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10 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TIGR GO annotations assigned by TIGR Arabidopsis annotation effort 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
KEGG pathways data set Wiring diagrams of molecular interactions, reactions, and relations 79.0
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139