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Gene : CYP705A4 A. thaliana

Gene ID  ? AT4G15380
Brief Description  cytochrome P450, family 705, subfamily A, polypeptide 4  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? cytochrome P450, family 705, subfamily A, polypeptide 4" (CYP705A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 15 (TAIR:AT3G20080.2).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? member of CYP705A  Source: TAIR, Jun 30, 2015.
Name  ? cytochrome P450, family 705, subfamily A, polypeptide 4

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G15380 0.5kb upstream 0.5kb upstream 2431   true Chr4: 8788159-8790589
AT4G15380 0.5kb upstream 0.5kb upstream 500   false Chr4: 8788159-8788658
AT4G15380 0.5kb downstream 0.5kb downstream 2431   true Chr4: 8788659-8791089
AT4G15380 0.5kb downstream 0.5kb downstream 500   false Chr4: 8790590-8791089
AT4G15380 1.0kb upstream 1.0kb upstream 2931   true Chr4: 8787659-8790589
AT4G15380 1.0kb upstream 1.0kb upstream 1000   false Chr4: 8787659-8788658
AT4G15380 1.0kb downstream 1.0kb downstream 2931   true Chr4: 8788659-8791589
AT4G15380 1.0kb downstream 1.0kb downstream 1000   false Chr4: 8790590-8791589
AT4G15380 3.0kb upstream 3.0kb upstream 4931   true Chr4: 8785659-8790589
AT4G15380 3.0kb upstream 3.0kb upstream 3000   false Chr4: 8785659-8788658
AT4G15380 3.0kb downstream 3.0kb downstream 4931   true Chr4: 8788659-8793589
AT4G15380 3.0kb downstream 3.0kb downstream 3000   false Chr4: 8790590-8793589

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0 Pathways

Data Source: KEGG

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9 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from InterPro    
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139