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Gene : AT4G16650 A. thaliana

Gene ID  ? AT4G16650
Brief Description  O-fucosyltransferase family protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G76270.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G16650 0.5kb upstream 0.5kb upstream 4983   true Chr4: 9371427-9376409
AT4G16650 0.5kb upstream 0.5kb upstream 500   false Chr4: 9371427-9371926
AT4G16650 0.5kb downstream 0.5kb downstream 4983   true Chr4: 9371927-9376909
AT4G16650 0.5kb downstream 0.5kb downstream 500   false Chr4: 9376410-9376909
AT4G16650 1.0kb upstream 1.0kb upstream 5483   true Chr4: 9370927-9376409
AT4G16650 1.0kb upstream 1.0kb upstream 1000   false Chr4: 9370927-9371926
AT4G16650 1.0kb downstream 1.0kb downstream 5483   true Chr4: 9371927-9377409
AT4G16650 1.0kb downstream 1.0kb downstream 1000   false Chr4: 9376410-9377409
AT4G16650 3.0kb upstream 3.0kb upstream 7483   true Chr4: 9368927-9376409
AT4G16650 3.0kb upstream 3.0kb upstream 3000   false Chr4: 9368927-9371926
AT4G16650 3.0kb downstream 3.0kb downstream 7483   true Chr4: 9371927-9379409
AT4G16650 3.0kb downstream 3.0kb downstream 3000   false Chr4: 9376410-9379409

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0