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Gene : AT4G22305 A. thaliana

Gene ID  ? AT4G22305
Brief Description  alpha/beta-Hydrolases superfamily protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: carboxylesterases (TAIR:AT4G22300.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in Arabidopsis  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G22305 0.5kb upstream 0.5kb upstream 2381   true Chr4: 11789327-11791707
AT4G22305 0.5kb upstream 0.5kb upstream 500   false Chr4: 11791208-11791707
AT4G22305 0.5kb downstream 0.5kb downstream 2381   true Chr4: 11788827-11791207
AT4G22305 0.5kb downstream 0.5kb downstream 500   false Chr4: 11788827-11789326
AT4G22305 1.0kb upstream 1.0kb upstream 2881   true Chr4: 11789327-11792207
AT4G22305 1.0kb upstream 1.0kb upstream 1000   false Chr4: 11791208-11792207
AT4G22305 1.0kb downstream 1.0kb downstream 2881   true Chr4: 11788327-11791207
AT4G22305 1.0kb downstream 1.0kb downstream 1000   false Chr4: 11788327-11789326
AT4G22305 3.0kb upstream 3.0kb upstream 4881   true Chr4: 11789327-11794207
AT4G22305 3.0kb upstream 3.0kb upstream 3000   false Chr4: 11791208-11794207
AT4G22305 3.0kb downstream 3.0kb downstream 4881   true Chr4: 11786327-11791207
AT4G22305 3.0kb downstream 3.0kb downstream 3000   false Chr4: 11786327-11789326

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0 Pathways

Data Source: KEGG

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7 Data Sets

Name Description Version
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0