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Gene : ATR1 A. thaliana

Gene ID  ? AT4G24520
Brief Description  P450 reductase 1  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? P450 reductase 1 (ATR1); FUNCTIONS IN: NADPH-hemoprotein reductase activity; INVOLVED IN: response to oxidative stress, phenylpropanoid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.  Source: TAIR, Jun 30, 2015.
Name  ? P450 reductase 1
  • synonyms:
  • ARABIDOPSIS CYTOCHROME REDUCTASE,
  • AR1

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Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G24520 0.5kb upstream 0.5kb upstream 5202   true Chr4: 12662561-12667762
AT4G24520 0.5kb upstream 0.5kb upstream 500   false Chr4: 12667263-12667762
AT4G24520 0.5kb downstream 0.5kb downstream 5202   true Chr4: 12662061-12667262
AT4G24520 0.5kb downstream 0.5kb downstream 500   false Chr4: 12662061-12662560
AT4G24520 1.0kb upstream 1.0kb upstream 5702   true Chr4: 12662561-12668262
AT4G24520 1.0kb upstream 1.0kb upstream 1000   false Chr4: 12667263-12668262
AT4G24520 1.0kb downstream 1.0kb downstream 5702   true Chr4: 12661561-12667262
AT4G24520 1.0kb downstream 1.0kb downstream 1000   false Chr4: 12661561-12662560
AT4G24520 3.0kb upstream 3.0kb upstream 7702   true Chr4: 12662561-12670262
AT4G24520 3.0kb upstream 3.0kb upstream 3000   false Chr4: 12667263-12670262
AT4G24520 3.0kb downstream 3.0kb downstream 7702   true Chr4: 12659561-12667262
AT4G24520 3.0kb downstream 3.0kb downstream 3000   false Chr4: 12659561-12662560

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Data Source: KEGG

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9 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139