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Gene : AT4G33700 A. thaliana

Gene ID  ? AT4G33700
Brief Description  CBS domain protein (DUF21)  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT2G14520.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G33700 0.5kb upstream 0.5kb upstream 3750   true Chr4: 16176232-16179981
AT4G33700 0.5kb upstream 0.5kb upstream 500   false Chr4: 16179482-16179981
AT4G33700 0.5kb downstream 0.5kb downstream 3750   true Chr4: 16175732-16179481
AT4G33700 0.5kb downstream 0.5kb downstream 500   false Chr4: 16175732-16176231
AT4G33700 1.0kb upstream 1.0kb upstream 4250   true Chr4: 16176232-16180481
AT4G33700 1.0kb upstream 1.0kb upstream 1000   false Chr4: 16179482-16180481
AT4G33700 1.0kb downstream 1.0kb downstream 4250   true Chr4: 16175232-16179481
AT4G33700 1.0kb downstream 1.0kb downstream 1000   false Chr4: 16175232-16176231
AT4G33700 3.0kb upstream 3.0kb upstream 6250   true Chr4: 16176232-16182481
AT4G33700 3.0kb upstream 3.0kb upstream 3000   false Chr4: 16179482-16182481
AT4G33700 3.0kb downstream 3.0kb downstream 6250   true Chr4: 16173232-16179481
AT4G33700 3.0kb downstream 3.0kb downstream 3000   false Chr4: 16173232-16176231

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0