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Gene : AT5G41280 A. thaliana

Gene ID  ? AT5G41280
Brief Description  Receptor-like protein kinase-related family protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? Receptor-like protein kinase-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: hypocotyl, root, callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Receptor-like protein kinase-related family protein (TAIR:AT5G41290.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT5G41280 0.5kb upstream 0.5kb upstream 2072   true Chr5: 16509007-16511078
AT5G41280 0.5kb upstream 0.5kb upstream 500   false Chr5: 16509007-16509506
AT5G41280 0.5kb downstream 0.5kb downstream 2072   true Chr5: 16509507-16511578
AT5G41280 0.5kb downstream 0.5kb downstream 500   false Chr5: 16511079-16511578
AT5G41280 1.0kb upstream 1.0kb upstream 2572   true Chr5: 16508507-16511078
AT5G41280 1.0kb upstream 1.0kb upstream 1000   false Chr5: 16508507-16509506
AT5G41280 1.0kb downstream 1.0kb downstream 2572   true Chr5: 16509507-16512078
AT5G41280 1.0kb downstream 1.0kb downstream 1000   false Chr5: 16511079-16512078
AT5G41280 3.0kb upstream 3.0kb upstream 4572   true Chr5: 16506507-16511078
AT5G41280 3.0kb upstream 3.0kb upstream 3000   false Chr5: 16506507-16509506
AT5G41280 3.0kb downstream 3.0kb downstream 4572   true Chr5: 16509507-16514078
AT5G41280 3.0kb downstream 3.0kb downstream 3000   false Chr5: 16511079-16514078

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TIGR GO annotations assigned by TIGR Arabidopsis annotation effort 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0