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mRNA : AT5G47700.2 A. thaliana

DB identifier  AT5G47700.2
Confidence Class  ? 2
Confidence Rating  ? ****
Computational Description  ? 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G00810.2).  Source: TAIR, Jun 30, 2015.
Brief Description  60S acidic ribosomal protein family  Source: Araport11 (06/2016).
Secondary Identifier  gene:4010713304

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0 Synonyms


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2 Five Prime UT Rs

DB identifier Length Chromosome Location
AT5G47700:five_prime_UTR:4 1   Chr5: 19328725-19328725
AT5G47700:five_prime_UTR:2 71   Chr5: 19328870-19328940

1 Gene

Gene ID Symbol Brief Description Is Obsolete?
AT5G47700 AT5G47700 60S acidic ribosomal protein family false

1 Three Prime UT Rs

DB identifier Length Chromosome Location
AT5G47700:three_prime_UTR:1 215   Chr5: 19327804-19328018


RNA-seq Expression



3 Data Sets

Name Description Version
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015

1 Ontology Annotations

Subject . Primary Identifier

Subject . Symbol

Ontology Term . Identifier

Ontology Term . Name
AT5G47700.2 AT5G47700.2 PO:0000005 cultured plant cell

1 Protein

DB identifier Length Molecular Weight
RLA13_ARATH 113   11247