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Gene : FTSZ1-1 A. thaliana

Gene ID  ? AT5G55280
Brief Description  homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.  Source: TAIR, Jun 30, 2015.
Name  ? homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1
  • synonyms:
  • CHLOROPLAST FTSZ,
  • CPFTSZ,
  • ATFTSZ1-1,
  • ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1

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10 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Annotation PubMed Id
A study evaluating the structure-activity relationships in FtsZ1 in A. thaliana is reported. 17468127
plastid division protein FtsZ1 may have a function during leaf development in thylakoid organization 17725544
The chloroplast division site placement involves a balance between the opposing activities of AtMinE1 and AtMinD1, which acts to prevent FtsZ ring formation anywhere outside of the mid-chloroplast. 18204083
Results describe the in vivo quantitative relationship between plastid division proteins FtsZ1 and FtsZ2 and identification of ARC6 and ARC3 in a native FtsZ complex. 18284374
Specific GTPase activities were determined and found to be different for FtsZ1-1 vs. FtsZ2-1. 19925792
Plastids in pollen grains and growing tubes from transgenic Arabidopsis thaliana lines expressing stroma-localised FtsZ1-green-fluorescent protein fusion in a vegetative cell-specific manner, are presented. 20195657
Evolution of FtsZ-1 in green plants, perhaps arising from an enhanced capacity for the regulation of Z ring composition and activity in vivo. 20421292
FtsZ1 and FtsZ2-1 are capable of in vitro self-assembly into two distinct filament types, termed type-I and type-II. During assembly of the type-II filaments the most common intermediate between the dimer and filament state is a tetramer. 21781955
These results suggest that besides ARC6-mediated anchoring, an additional FtsZ-anchoring mechanism is present in chloroplasts. 23578755
In plants lacking ARC3, the key negative regulator of FtsZ assembly, FtsZ1/FtsZ2 turnover was threefold slower. 25731613

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT5G55280 0.5kb upstream 0.5kb upstream 2550   true Chr5: 22420600-22423149
AT5G55280 0.5kb upstream 0.5kb upstream 500   false Chr5: 22422650-22423149
AT5G55280 0.5kb downstream 0.5kb downstream 2550   true Chr5: 22420100-22422649
AT5G55280 0.5kb downstream 0.5kb downstream 500   false Chr5: 22420100-22420599
AT5G55280 1.0kb upstream 1.0kb upstream 3050   true Chr5: 22420600-22423649
AT5G55280 1.0kb upstream 1.0kb upstream 1000   false Chr5: 22422650-22423649
AT5G55280 1.0kb downstream 1.0kb downstream 3050   true Chr5: 22419600-22422649
AT5G55280 1.0kb downstream 1.0kb downstream 1000   false Chr5: 22419600-22420599
AT5G55280 3.0kb upstream 3.0kb upstream 5050   true Chr5: 22420600-22425649
AT5G55280 3.0kb upstream 3.0kb upstream 3000   false Chr5: 22422650-22425649
AT5G55280 3.0kb downstream 3.0kb downstream 5050   true Chr5: 22417600-22422649
AT5G55280 3.0kb downstream 3.0kb downstream 3000   false Chr5: 22417600-22420599

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0 Pathways

Data Source: KEGG

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11 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TIGR GO annotations assigned by TIGR Arabidopsis annotation effort 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
GeneRIF Concise phrase describing gene function and publication associated with NCBI Gene records 8/12/2016
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139