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Gene : MYB59 A. thaliana

Gene ID  ? AT5G59780
Brief Description  myb domain protein 59  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? myb domain protein 59 (MYB59); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 48 (TAIR:AT3G46130.3).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes a putative transcription factor (MYB59).  Source: TAIR, Jun 30, 2015.
Name  ? myb domain protein 59
  • synonyms:
  • ATMYB59-3,
  • MYB DOMAIN PROTEIN 59,
  • ATMYB59-2,
  • ATMYB59-1,
  • ATMYB59

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT5G59780 0.5kb upstream 0.5kb upstream 2195   true Chr5: 24081868-24084062
AT5G59780 0.5kb upstream 0.5kb upstream 500   false Chr5: 24083563-24084062
AT5G59780 0.5kb downstream 0.5kb downstream 2195   true Chr5: 24081368-24083562
AT5G59780 0.5kb downstream 0.5kb downstream 500   false Chr5: 24081368-24081867
AT5G59780 1.0kb upstream 1.0kb upstream 2695   true Chr5: 24081868-24084562
AT5G59780 1.0kb upstream 1.0kb upstream 1000   false Chr5: 24083563-24084562
AT5G59780 1.0kb downstream 1.0kb downstream 2695   true Chr5: 24080868-24083562
AT5G59780 1.0kb downstream 1.0kb downstream 1000   false Chr5: 24080868-24081867
AT5G59780 3.0kb upstream 3.0kb upstream 4695   true Chr5: 24081868-24086562
AT5G59780 3.0kb upstream 3.0kb upstream 3000   false Chr5: 24083563-24086562
AT5G59780 3.0kb downstream 3.0kb downstream 4695   true Chr5: 24078868-24083562
AT5G59780 3.0kb downstream 3.0kb downstream 3000   false Chr5: 24078868-24081867

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Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from GOC GO annotations assigned by the GO Consortium 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0