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Gene : DAR6 A. thaliana

Gene ID  ? AT5G66620
Brief Description  DA1-related protein 6  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? DA1-related protein 6 (DAR6); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 5 (TAIR:AT5G66630.1).  Source: TAIR, Jun 30, 2015.
Name  ? DA1-related protein 6

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT5G66620 0.5kb upstream 0.5kb upstream 4420   true Chr5: 26587911-26592330
AT5G66620 0.5kb upstream 0.5kb upstream 500   false Chr5: 26587911-26588410
AT5G66620 0.5kb downstream 0.5kb downstream 4420   true Chr5: 26588411-26592830
AT5G66620 0.5kb downstream 0.5kb downstream 500   false Chr5: 26592331-26592830
AT5G66620 1.0kb upstream 1.0kb upstream 4920   true Chr5: 26587411-26592330
AT5G66620 1.0kb upstream 1.0kb upstream 1000   false Chr5: 26587411-26588410
AT5G66620 1.0kb downstream 1.0kb downstream 4920   true Chr5: 26588411-26593330
AT5G66620 1.0kb downstream 1.0kb downstream 1000   false Chr5: 26592331-26593330
AT5G66620 3.0kb upstream 3.0kb upstream 6920   true Chr5: 26585411-26592330
AT5G66620 3.0kb upstream 3.0kb upstream 3000   false Chr5: 26585411-26588410
AT5G66620 3.0kb downstream 3.0kb downstream 6920   true Chr5: 26588411-26595330
AT5G66620 3.0kb downstream 3.0kb downstream 3000   false Chr5: 26592331-26595330

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0