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Gene : ASL1 A. thaliana

Gene ID  ? AT5G66870
Brief Description  ASYMMETRIC LEAVES 2-like 1  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? ASYMMETRIC LEAVES 2-like 1 (ASL1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883), Asymmetric leaves, AS2/LOB (InterPro:IPR017414); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.  Source: TAIR, Jun 30, 2015.
Name  ? ASYMMETRIC LEAVES 2-like 1
  • synonyms:
  • LBD36,
  • LATERAL ORGAN BOUNDARIES DOMAIN GENE 36

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT5G66870 0.5kb upstream 0.5kb upstream 3457   true Chr5: 26705285-26708741
AT5G66870 0.5kb upstream 0.5kb upstream 500   false Chr5: 26705285-26705784
AT5G66870 0.5kb downstream 0.5kb downstream 3457   true Chr5: 26705785-26709241
AT5G66870 0.5kb downstream 0.5kb downstream 500   false Chr5: 26708742-26709241
AT5G66870 1.0kb upstream 1.0kb upstream 3957   true Chr5: 26704785-26708741
AT5G66870 1.0kb upstream 1.0kb upstream 1000   false Chr5: 26704785-26705784
AT5G66870 1.0kb downstream 1.0kb downstream 3957   true Chr5: 26705785-26709741
AT5G66870 1.0kb downstream 1.0kb downstream 1000   false Chr5: 26708742-26709741
AT5G66870 3.0kb upstream 3.0kb upstream 5957   true Chr5: 26702785-26708741
AT5G66870 3.0kb upstream 3.0kb upstream 3000   false Chr5: 26702785-26705784
AT5G66870 3.0kb downstream 3.0kb downstream 5957   true Chr5: 26705785-26711741
AT5G66870 3.0kb downstream 3.0kb downstream 3000   false Chr5: 26708742-26711741

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Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016