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Pseudogene : AT3G29150 A. thaliana

Gene ID  AT3G29150 Brief Description  pseudogene of F-box family protein  Source: Araport11 (06/2016).
Is Obsolete?  false Curator Summary  pseudogene of F-box family protein  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G29150 0.5kb upstream 0.5kb upstream 1382   true Chr3: 11108313-11109694
AT3G29150 0.5kb upstream 0.5kb upstream 500   false Chr3: 11109195-11109694
AT3G29150 0.5kb downstream 0.5kb downstream 1382   true Chr3: 11107813-11109194
AT3G29150 0.5kb downstream 0.5kb downstream 500   false Chr3: 11107813-11108312
AT3G29150 1.0kb upstream 1.0kb upstream 1882   true Chr3: 11108313-11110194
AT3G29150 1.0kb upstream 1.0kb upstream 1000   false Chr3: 11109195-11110194
AT3G29150 1.0kb downstream 1.0kb downstream 1882   true Chr3: 11107313-11109194
AT3G29150 1.0kb downstream 1.0kb downstream 1000   false Chr3: 11107313-11108312
AT3G29150 3.0kb upstream 3.0kb upstream 3882   true Chr3: 11108313-11112194
AT3G29150 3.0kb upstream 3.0kb upstream 3000   false Chr3: 11109195-11112194
AT3G29150 3.0kb downstream 3.0kb downstream 3882   true Chr3: 11105313-11109194
AT3G29150 3.0kb downstream 3.0kb downstream 3000   false Chr3: 11105313-11108312

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3 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)

1 Pseudogenic Transcripts

DB identifier Length Chromosome Location
AT3G29150.1 882   Chr3: 11108313-11109194