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Gene : GPX7 A. thaliana

Gene ID  ? AT4G31870
Brief Description  glutathione peroxidase 7  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? glutathione peroxidase 7 (GPX7); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 1 (TAIR:AT2G25080.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes glutathione peroxidase.  Source: TAIR, Jun 30, 2015.
Name  ? glutathione peroxidase 7
  • synonyms:
  • ATGPX7,

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1 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Annotation PubMed Id
Chloroplastic forms of Glutathione peroxidases regulate cellular photooxidative tolerance and immune responses. GPX1 and GPX7 have partially overlapping functions. [GPX7] 19363092


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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G31870 0.5kb upstream 0.5kb upstream 2909   true Chr4: 15409578-15412486
AT4G31870 0.5kb upstream 0.5kb upstream 500   false Chr4: 15409578-15410077
AT4G31870 0.5kb downstream 0.5kb downstream 2909   true Chr4: 15410078-15412986
AT4G31870 0.5kb downstream 0.5kb downstream 500   false Chr4: 15412487-15412986
AT4G31870 1.0kb upstream 1.0kb upstream 3409   true Chr4: 15409078-15412486
AT4G31870 1.0kb upstream 1.0kb upstream 1000   false Chr4: 15409078-15410077
AT4G31870 1.0kb downstream 1.0kb downstream 3409   true Chr4: 15410078-15413486
AT4G31870 1.0kb downstream 1.0kb downstream 1000   false Chr4: 15412487-15413486
AT4G31870 3.0kb upstream 3.0kb upstream 5409   true Chr4: 15407078-15412486
AT4G31870 3.0kb upstream 3.0kb upstream 3000   false Chr4: 15407078-15410077
AT4G31870 3.0kb downstream 3.0kb downstream 5409   true Chr4: 15410078-15415486
AT4G31870 3.0kb downstream 3.0kb downstream 3000   false Chr4: 15412487-15415486


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2 Pathways

Data Source: KEGG

Identifier Name
00480 Glutathione metabolism
00590 Arachidonic acid metabolism

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10 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
KEGG pathways data set Wiring diagrams of molecular interactions, reactions, and relations 79.0
GeneRIF Concise phrase describing gene function and publication associated with NCBI Gene records 8/12/2016