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Gene : AT5G02550 A. thaliana

Gene ID  ? AT5G02550
Brief Description  hypothetical protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? unknown protein.  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT5G02550 0.5kb upstream 0.5kb upstream 1165   true Chr5: 572970-574134
AT5G02550 0.5kb upstream 0.5kb upstream 500   false Chr5: 573635-574134
AT5G02550 0.5kb downstream 0.5kb downstream 1165   true Chr5: 572470-573634
AT5G02550 0.5kb downstream 0.5kb downstream 500   false Chr5: 572470-572969
AT5G02550 1.0kb upstream 1.0kb upstream 1665   true Chr5: 572970-574634
AT5G02550 1.0kb upstream 1.0kb upstream 1000   false Chr5: 573635-574634
AT5G02550 1.0kb downstream 1.0kb downstream 1665   true Chr5: 571970-573634
AT5G02550 1.0kb downstream 1.0kb downstream 1000   false Chr5: 571970-572969
AT5G02550 3.0kb upstream 3.0kb upstream 3665   true Chr5: 572970-576634
AT5G02550 3.0kb upstream 3.0kb upstream 3000   false Chr5: 573635-576634
AT5G02550 3.0kb downstream 3.0kb downstream 3665   true Chr5: 569970-573634
AT5G02550 3.0kb downstream 3.0kb downstream 3000   false Chr5: 569970-572969

Proteins

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0 Pathways

Data Source: KEGG

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Expression

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Array Expression

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7 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TIGR GO annotations assigned by TIGR Arabidopsis annotation effort 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07