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Gene : BZIP27 A. thaliana

Gene ID  ? AT2G17770
Brief Description  basic region/leucine zipper motif 27  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.  Source: TAIR, Jun 30, 2015.
Name  ? basic region/leucine zipper motif 27
  • synonyms:
  • ATBZIP27,
  • FDP,
  • basic region/leucine zipper motif 27,
  • FD PARALOG

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G17770 0.5kb upstream 0.5kb upstream 1999   true Chr2: 7722325-7724323
AT2G17770 0.5kb upstream 0.5kb upstream 500   false Chr2: 7722325-7722824
AT2G17770 0.5kb downstream 0.5kb downstream 1999   true Chr2: 7722825-7724823
AT2G17770 0.5kb downstream 0.5kb downstream 500   false Chr2: 7724324-7724823
AT2G17770 1.0kb upstream 1.0kb upstream 2499   true Chr2: 7721825-7724323
AT2G17770 1.0kb upstream 1.0kb upstream 1000   false Chr2: 7721825-7722824
AT2G17770 1.0kb downstream 1.0kb downstream 2499   true Chr2: 7722825-7725323
AT2G17770 1.0kb downstream 1.0kb downstream 1000   false Chr2: 7724324-7725323
AT2G17770 3.0kb upstream 3.0kb upstream 4499   true Chr2: 7719825-7724323
AT2G17770 3.0kb upstream 3.0kb upstream 3000   false Chr2: 7719825-7722824
AT2G17770 3.0kb downstream 3.0kb downstream 4499   true Chr2: 7722825-7727323
AT2G17770 3.0kb downstream 3.0kb downstream 3000   false Chr2: 7724324-7727323

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Data Source: KEGG

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10 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139