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Gene : AT5G11400 A. thaliana

Gene ID  ? AT5G11400
Brief Description  Protein kinase superfamily protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11410.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT5G11400 0.5kb upstream 0.5kb upstream 1946   true Chr5: 3636614-3638559
AT5G11400 0.5kb upstream 0.5kb upstream 500   false Chr5: 3638060-3638559
AT5G11400 0.5kb downstream 0.5kb downstream 1946   true Chr5: 3636114-3638059
AT5G11400 0.5kb downstream 0.5kb downstream 500   false Chr5: 3636114-3636613
AT5G11400 1.0kb upstream 1.0kb upstream 2446   true Chr5: 3636614-3639059
AT5G11400 1.0kb upstream 1.0kb upstream 1000   false Chr5: 3638060-3639059
AT5G11400 1.0kb downstream 1.0kb downstream 2446   true Chr5: 3635614-3638059
AT5G11400 1.0kb downstream 1.0kb downstream 1000   false Chr5: 3635614-3636613
AT5G11400 3.0kb upstream 3.0kb upstream 4446   true Chr5: 3636614-3641059
AT5G11400 3.0kb upstream 3.0kb upstream 3000   false Chr5: 3638060-3641059
AT5G11400 3.0kb downstream 3.0kb downstream 4446   true Chr5: 3633614-3638059
AT5G11400 3.0kb downstream 3.0kb downstream 3000   false Chr5: 3633614-3636613

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0