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Gene : AT3G26040 A. thaliana

Gene ID  ? AT3G26040
Brief Description  HXXXD-type acyl-transferase family protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G26040 0.5kb upstream 0.5kb upstream 1854   true Chr3: 9519241-9521094
AT3G26040 0.5kb upstream 0.5kb upstream 500   false Chr3: 9519241-9519740
AT3G26040 0.5kb downstream 0.5kb downstream 1854   true Chr3: 9519741-9521594
AT3G26040 0.5kb downstream 0.5kb downstream 500   false Chr3: 9521095-9521594
AT3G26040 1.0kb upstream 1.0kb upstream 2354   true Chr3: 9518741-9521094
AT3G26040 1.0kb upstream 1.0kb upstream 1000   false Chr3: 9518741-9519740
AT3G26040 1.0kb downstream 1.0kb downstream 2354   true Chr3: 9519741-9522094
AT3G26040 1.0kb downstream 1.0kb downstream 1000   false Chr3: 9521095-9522094
AT3G26040 3.0kb upstream 3.0kb upstream 4354   true Chr3: 9516741-9521094
AT3G26040 3.0kb upstream 3.0kb upstream 3000   false Chr3: 9516741-9519740
AT3G26040 3.0kb downstream 3.0kb downstream 4354   true Chr3: 9519741-9524094
AT3G26040 3.0kb downstream 3.0kb downstream 3000   false Chr3: 9521095-9524094

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0