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Gene : AT3G26070 A. thaliana

Gene ID  ? AT3G26070
Brief Description  Plastid-lipid associated protein PAP / fibrillin family protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26080.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G26070 0.5kb upstream 0.5kb upstream 2517   true Chr3: 9526187-9528703
AT3G26070 0.5kb upstream 0.5kb upstream 500   false Chr3: 9526187-9526686
AT3G26070 0.5kb downstream 0.5kb downstream 2517   true Chr3: 9526687-9529203
AT3G26070 0.5kb downstream 0.5kb downstream 500   false Chr3: 9528704-9529203
AT3G26070 1.0kb upstream 1.0kb upstream 3017   true Chr3: 9525687-9528703
AT3G26070 1.0kb upstream 1.0kb upstream 1000   false Chr3: 9525687-9526686
AT3G26070 1.0kb downstream 1.0kb downstream 3017   true Chr3: 9526687-9529703
AT3G26070 1.0kb downstream 1.0kb downstream 1000   false Chr3: 9528704-9529703
AT3G26070 3.0kb upstream 3.0kb upstream 5017   true Chr3: 9523687-9528703
AT3G26070 3.0kb upstream 3.0kb upstream 3000   false Chr3: 9523687-9526686
AT3G26070 3.0kb downstream 3.0kb downstream 5017   true Chr3: 9526687-9531703
AT3G26070 3.0kb downstream 3.0kb downstream 3000   false Chr3: 9528704-9531703

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TIGR GO annotations assigned by TIGR Arabidopsis annotation effort 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0