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Gene : AT3G10910 A. thaliana
Gene ID  ? AT3G10910
Brief Description  RING/U-box superfamily protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1).  Source: TAIR, Jun 30, 2015.
  • synonyms:
  • DAFL1,
  • DAF-Like gene 1
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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G10910 0.5kb upstream 0.5kb upstream 1609   true Chr3: 3412911-3414519
AT3G10910 0.5kb upstream 0.5kb upstream 500   false Chr3: 3414020-3414519
AT3G10910 0.5kb downstream 0.5kb downstream 1609   true Chr3: 3412411-3414019
AT3G10910 0.5kb downstream 0.5kb downstream 500   false Chr3: 3412411-3412910
AT3G10910 1.0kb upstream 1.0kb upstream 2109   true Chr3: 3412911-3415019
AT3G10910 1.0kb upstream 1.0kb upstream 1000   false Chr3: 3414020-3415019
AT3G10910 1.0kb downstream 1.0kb downstream 2109   true Chr3: 3411911-3414019
AT3G10910 1.0kb downstream 1.0kb downstream 1000   false Chr3: 3411911-3412910
AT3G10910 3.0kb upstream 3.0kb upstream 4109   true Chr3: 3412911-3417019
AT3G10910 3.0kb upstream 3.0kb upstream 3000   false Chr3: 3414020-3417019
AT3G10910 3.0kb downstream 3.0kb downstream 4109   true Chr3: 3409911-3414019
AT3G10910 3.0kb downstream 3.0kb downstream 3000   false Chr3: 3409911-3412910

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139
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