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Gene : ENODL20 A. thaliana

Gene ID  ? AT2G27035
Brief Description  early nodulin-like protein 20  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? early nodulin-like protein 20 (ENODL20); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 17 (TAIR:AT5G15350.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Has been classified as a stellacyanin. Has also been classified as an early nodulin-like protein (ENODL), because it does not have a His residue involved in Cu binding. ENODLs are proteins having one plastocyanin-like (PCNL) domain lacking the amino acid residues necessary for Cu binding.  Source: TAIR, Jun 30, 2015.
Name  ? early nodulin-like protein 20
  • synonyms:
  • AtENODL20

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G27035 0.5kb upstream 0.5kb upstream 1468   true Chr2: 11535018-11536485
AT2G27035 0.5kb upstream 0.5kb upstream 500   false Chr2: 11535018-11535517
AT2G27035 0.5kb downstream 0.5kb downstream 1468   true Chr2: 11535518-11536985
AT2G27035 0.5kb downstream 0.5kb downstream 500   false Chr2: 11536486-11536985
AT2G27035 1.0kb upstream 1.0kb upstream 1968   true Chr2: 11534518-11536485
AT2G27035 1.0kb upstream 1.0kb upstream 1000   false Chr2: 11534518-11535517
AT2G27035 1.0kb downstream 1.0kb downstream 1968   true Chr2: 11535518-11537485
AT2G27035 1.0kb downstream 1.0kb downstream 1000   false Chr2: 11536486-11537485
AT2G27035 3.0kb upstream 3.0kb upstream 3968   true Chr2: 11532518-11536485
AT2G27035 3.0kb upstream 3.0kb upstream 3000   false Chr2: 11532518-11535517
AT2G27035 3.0kb downstream 3.0kb downstream 3968   true Chr2: 11535518-11539485
AT2G27035 3.0kb downstream 3.0kb downstream 3000   false Chr2: 11536486-11539485

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Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TIGR GO annotations assigned by TIGR Arabidopsis annotation effort 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0