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Gene : AT1G47495 A. thaliana

Gene ID  ? AT1G47495
Brief Description  hypothetical protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45403.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT1G47495 0.5kb upstream 0.5kb upstream 1369   true Chr1: 17428945-17430313
AT1G47495 0.5kb upstream 0.5kb upstream 500   false Chr1: 17429814-17430313
AT1G47495 0.5kb downstream 0.5kb downstream 1369   true Chr1: 17428445-17429813
AT1G47495 0.5kb downstream 0.5kb downstream 500   false Chr1: 17428445-17428944
AT1G47495 1.0kb upstream 1.0kb upstream 1869   true Chr1: 17428945-17430813
AT1G47495 1.0kb upstream 1.0kb upstream 1000   false Chr1: 17429814-17430813
AT1G47495 1.0kb downstream 1.0kb downstream 1869   true Chr1: 17427945-17429813
AT1G47495 1.0kb downstream 1.0kb downstream 1000   false Chr1: 17427945-17428944
AT1G47495 3.0kb upstream 3.0kb upstream 3869   true Chr1: 17428945-17432813
AT1G47495 3.0kb upstream 3.0kb upstream 3000   false Chr1: 17429814-17432813
AT1G47495 3.0kb downstream 3.0kb downstream 3869   true Chr1: 17425945-17429813
AT1G47495 3.0kb downstream 3.0kb downstream 3000   false Chr1: 17425945-17428944

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0 Pathways

Data Source: KEGG

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6 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TIGR GO annotations assigned by TIGR Arabidopsis annotation effort 8/01/2016
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07