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Gene : AT1G13470 A. thaliana

Gene ID  ? AT1G13470
Brief Description  hypothetical protein (DUF1262)  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13520.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT1G13470 0.5kb upstream 0.5kb upstream 1985   true Chr1: 4620101-4622085
AT1G13470 0.5kb upstream 0.5kb upstream 500   false Chr1: 4621586-4622085
AT1G13470 0.5kb downstream 0.5kb downstream 1985   true Chr1: 4619601-4621585
AT1G13470 0.5kb downstream 0.5kb downstream 500   false Chr1: 4619601-4620100
AT1G13470 1.0kb upstream 1.0kb upstream 2485   true Chr1: 4620101-4622585
AT1G13470 1.0kb upstream 1.0kb upstream 1000   false Chr1: 4621586-4622585
AT1G13470 1.0kb downstream 1.0kb downstream 2485   true Chr1: 4619101-4621585
AT1G13470 1.0kb downstream 1.0kb downstream 1000   false Chr1: 4619101-4620100
AT1G13470 3.0kb upstream 3.0kb upstream 4485   true Chr1: 4620101-4624585
AT1G13470 3.0kb upstream 3.0kb upstream 3000   false Chr1: 4621586-4624585
AT1G13470 3.0kb downstream 3.0kb downstream 4485   true Chr1: 4617101-4621585
AT1G13470 3.0kb downstream 3.0kb downstream 3000   false Chr1: 4617101-4620100

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TIGR GO annotations assigned by TIGR Arabidopsis annotation effort 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0