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Gene : AT5G41650 A. thaliana

Gene ID  ? AT5G41650
Brief Description  Lactoylglutathione lyase / glyoxalase I family protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? Lactoylglutathione lyase / glyoxalase I family protein; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G64185.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT5G41650 0.5kb upstream 0.5kb upstream 1448   true Chr5: 16654413-16655860
AT5G41650 0.5kb upstream 0.5kb upstream 500   false Chr5: 16654413-16654912
AT5G41650 0.5kb downstream 0.5kb downstream 1448   true Chr5: 16654913-16656360
AT5G41650 0.5kb downstream 0.5kb downstream 500   false Chr5: 16655861-16656360
AT5G41650 1.0kb upstream 1.0kb upstream 1948   true Chr5: 16653913-16655860
AT5G41650 1.0kb upstream 1.0kb upstream 1000   false Chr5: 16653913-16654912
AT5G41650 1.0kb downstream 1.0kb downstream 1948   true Chr5: 16654913-16656860
AT5G41650 1.0kb downstream 1.0kb downstream 1000   false Chr5: 16655861-16656860
AT5G41650 3.0kb upstream 3.0kb upstream 3948   true Chr5: 16651913-16655860
AT5G41650 3.0kb upstream 3.0kb upstream 3000   false Chr5: 16651913-16654912
AT5G41650 3.0kb downstream 3.0kb downstream 3948   true Chr5: 16654913-16658860
AT5G41650 3.0kb downstream 3.0kb downstream 3000   false Chr5: 16655861-16658860

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0 Pathways

Data Source: KEGG

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Expression

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TIGR GO annotations assigned by TIGR Arabidopsis annotation effort 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0