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Gene : Prx37 A. thaliana

Gene ID  ? AT4G08770
Brief Description  Peroxidase superfamily protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: vacuole; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G08780.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes a putative apoplastic peroxidase Prx37. Primarily expressed in the vascular bundles. Overexpression renders a dwarf phenotype with smaller plants and delayed development. Plants overexpressing Prx37 also shows an increase in the amount of esterified phenolic material associated with their walls.  Source: TAIR, Jun 30, 2015.
Name  ? peroxidase 37

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G08770 0.5kb upstream 0.5kb upstream 2862   true Chr4: 5598037-5600898
AT4G08770 0.5kb upstream 0.5kb upstream 500   false Chr4: 5600399-5600898
AT4G08770 0.5kb downstream 0.5kb downstream 2862   true Chr4: 5597537-5600398
AT4G08770 0.5kb downstream 0.5kb downstream 500   false Chr4: 5597537-5598036
AT4G08770 1.0kb upstream 1.0kb upstream 3362   true Chr4: 5598037-5601398
AT4G08770 1.0kb upstream 1.0kb upstream 1000   false Chr4: 5600399-5601398
AT4G08770 1.0kb downstream 1.0kb downstream 3362   true Chr4: 5597037-5600398
AT4G08770 1.0kb downstream 1.0kb downstream 1000   false Chr4: 5597037-5598036
AT4G08770 3.0kb upstream 3.0kb upstream 5362   true Chr4: 5598037-5603398
AT4G08770 3.0kb upstream 3.0kb upstream 3000   false Chr4: 5600399-5603398
AT4G08770 3.0kb downstream 3.0kb downstream 5362   true Chr4: 5595037-5600398
AT4G08770 3.0kb downstream 3.0kb downstream 3000   false Chr4: 5595037-5598036

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3 Pathways

Data Source: KEGG

Identifier Name
01100 Metabolic pathways
01110 Biosynthesis of secondary metabolites
00940 Phenylpropanoid biosynthesis

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10 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
KEGG pathways data set Wiring diagrams of molecular interactions, reactions, and relations 79.0
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139