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Gene : RLP19 A. thaliana

Gene ID  ? AT2G15080
Brief Description  receptor like protein 19  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? receptor like protein 19 (RLP19); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1).  Source: TAIR, Jun 30, 2015.
Name  ? receptor like protein 19
  • synonyms:
  • receptor like protein 19,
  • AtRLP19

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G15080 0.5kb upstream 0.5kb upstream 4242   true Chr2: 6532761-6537002
AT2G15080 0.5kb upstream 0.5kb upstream 500   false Chr2: 6532761-6533260
AT2G15080 0.5kb downstream 0.5kb downstream 4242   true Chr2: 6533261-6537502
AT2G15080 0.5kb downstream 0.5kb downstream 500   false Chr2: 6537003-6537502
AT2G15080 1.0kb upstream 1.0kb upstream 4742   true Chr2: 6532261-6537002
AT2G15080 1.0kb upstream 1.0kb upstream 1000   false Chr2: 6532261-6533260
AT2G15080 1.0kb downstream 1.0kb downstream 4742   true Chr2: 6533261-6538002
AT2G15080 1.0kb downstream 1.0kb downstream 1000   false Chr2: 6537003-6538002
AT2G15080 3.0kb upstream 3.0kb upstream 6742   true Chr2: 6530261-6537002
AT2G15080 3.0kb upstream 3.0kb upstream 3000   false Chr2: 6530261-6533260
AT2G15080 3.0kb downstream 3.0kb downstream 6742   true Chr2: 6533261-6540002
AT2G15080 3.0kb downstream 3.0kb downstream 3000   false Chr2: 6537003-6540002

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0 Pathways

Data Source: KEGG

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Expression

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9 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139