help  | faq  | software  | ARAPORT

Gene : GSTF10 A. thaliana

Gene ID  ? AT2G30870
Brief Description  glutathione S-transferase PHI 10  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? glutathione S-transferase PHI 10 (GSTF10); FUNCTIONS IN: glutathione transferase activity, copper ion binding, glutathione binding; INVOLVED IN: response to cadmium ion, response to water deprivation, toxin catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 9 (TAIR:AT2G30860.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002)  Source: TAIR, Jun 30, 2015.
Name  ? glutathione S-transferase PHI 10
  • synonyms:
  • ATGSTF10,
  • ERD13,
  • ATGSTF4,

Locus History Displayer

Publication Counts Displayer

1 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Annotation PubMed Id
AtGSTF10 is involved in stress tolerance and the BAK1-mediated spontaneous cell death signaling pathway in Arabidopsis. 19118534


Sequence Feature Displayer

Gene Structure Displayer

J Browse Displayer

Overlapping Features Displayer

12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G30870 0.5kb upstream 0.5kb upstream 1887   true Chr2: 13140790-13142676
AT2G30870 0.5kb upstream 0.5kb upstream 500   false Chr2: 13140790-13141289
AT2G30870 0.5kb downstream 0.5kb downstream 1887   true Chr2: 13141290-13143176
AT2G30870 0.5kb downstream 0.5kb downstream 500   false Chr2: 13142677-13143176
AT2G30870 1.0kb upstream 1.0kb upstream 2387   true Chr2: 13140290-13142676
AT2G30870 1.0kb upstream 1.0kb upstream 1000   false Chr2: 13140290-13141289
AT2G30870 1.0kb downstream 1.0kb downstream 2387   true Chr2: 13141290-13143676
AT2G30870 1.0kb downstream 1.0kb downstream 1000   false Chr2: 13142677-13143676
AT2G30870 3.0kb upstream 3.0kb upstream 4387   true Chr2: 13138290-13142676
AT2G30870 3.0kb upstream 3.0kb upstream 3000   false Chr2: 13138290-13141289
AT2G30870 3.0kb downstream 3.0kb downstream 4387   true Chr2: 13141290-13145676
AT2G30870 3.0kb downstream 3.0kb downstream 3000   false Chr2: 13142677-13145676


Protein Displayer


Gene Ontology Displayer

1 Pathways

Data Source: KEGG

Identifier Name
00480 Glutathione metabolism

Gene --> Ontology term

Gene --> Pathways


Plant Ontology Displayer

Bar Efp Browser Displayer

Array Expression

RNA-seq Expression


Save / Export






Cytoscape Network Displayer


Homologue Displayer

Phytomine Ortholog Displayer


Alelle Table Displayer

Stock Gene Table Displayer



12 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from GOC GO annotations assigned by the GO Consortium 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
KEGG pathways data set Wiring diagrams of molecular interactions, reactions, and relations 79.0
GeneRIF Concise phrase describing gene function and publication associated with NCBI Gene records 8/12/2016
IntAct interactions data set Curated binary and complex protein-protein interactions for Arabidopsis thaliana 8/02/2016
BioGRID interaction data set Curated set of genetic and physical interactions for Arabidopsis thaliana 3.4.139