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Gene : BAS1 A. thaliana

Gene ID  ? AT2G26710
Brief Description  Cytochrome P450 superfamily protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); FUNCTIONS IN: steroid hydroxylase activity, oxygen binding; INVOLVED IN: response to light stimulus, response to brassinosteroid stimulus, brassinosteroid homeostasis, brassinosteroid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 8 (TAIR:AT3G14620.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.  Source: TAIR, Jun 30, 2015.
Name  ? PHYB ACTIVATION TAGGED SUPPRESSOR 1
  • synonyms:
  • CYP72B1,
  • CYP734A1

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G26710 0.5kb upstream 0.5kb upstream 3859   true Chr2: 11379963-11383821
AT2G26710 0.5kb upstream 0.5kb upstream 500   false Chr2: 11379963-11380462
AT2G26710 0.5kb downstream 0.5kb downstream 3859   true Chr2: 11380463-11384321
AT2G26710 0.5kb downstream 0.5kb downstream 500   false Chr2: 11383822-11384321
AT2G26710 1.0kb upstream 1.0kb upstream 4359   true Chr2: 11379463-11383821
AT2G26710 1.0kb upstream 1.0kb upstream 1000   false Chr2: 11379463-11380462
AT2G26710 1.0kb downstream 1.0kb downstream 4359   true Chr2: 11380463-11384821
AT2G26710 1.0kb downstream 1.0kb downstream 1000   false Chr2: 11383822-11384821
AT2G26710 3.0kb upstream 3.0kb upstream 6359   true Chr2: 11377463-11383821
AT2G26710 3.0kb upstream 3.0kb upstream 3000   false Chr2: 11377463-11380462
AT2G26710 3.0kb downstream 3.0kb downstream 6359   true Chr2: 11380463-11386821
AT2G26710 3.0kb downstream 3.0kb downstream 3000   false Chr2: 11383822-11386821

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1 Pathways

Data Source: KEGG

Identifier Name
00905 Brassinosteroid biosynthesis

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Expression

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9 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from InterPro    
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
KEGG pathways data set Wiring diagrams of molecular interactions, reactions, and relations 79.0