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Gene : CYP706A5 A. thaliana

Gene ID  ? AT4G12310
Brief Description  cytochrome P450, family 706, subfamily A, polypeptide 5  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? cytochrome P450, family 706, subfamily A, polypeptide 5" (CYP706A5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? member of CYP706A  Source: TAIR, Jun 30, 2015.
Name  ? cytochrome P450, family 706, subfamily A, polypeptide 5

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G12310 0.5kb upstream 0.5kb upstream 3287   true Chr4: 7309898-7313184
AT4G12310 0.5kb upstream 0.5kb upstream 500   false Chr4: 7312685-7313184
AT4G12310 0.5kb downstream 0.5kb downstream 3287   true Chr4: 7309398-7312684
AT4G12310 0.5kb downstream 0.5kb downstream 500   false Chr4: 7309398-7309897
AT4G12310 1.0kb upstream 1.0kb upstream 3787   true Chr4: 7309898-7313684
AT4G12310 1.0kb upstream 1.0kb upstream 1000   false Chr4: 7312685-7313684
AT4G12310 1.0kb downstream 1.0kb downstream 3787   true Chr4: 7308898-7312684
AT4G12310 1.0kb downstream 1.0kb downstream 1000   false Chr4: 7308898-7309897
AT4G12310 3.0kb upstream 3.0kb upstream 5787   true Chr4: 7309898-7315684
AT4G12310 3.0kb upstream 3.0kb upstream 3000   false Chr4: 7312685-7315684
AT4G12310 3.0kb downstream 3.0kb downstream 5787   true Chr4: 7306898-7312684
AT4G12310 3.0kb downstream 3.0kb downstream 3000   false Chr4: 7306898-7309897

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from InterPro    
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0