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Gene : AT2G31820 A. thaliana

Gene ID  ? AT2G31820
Brief Description  Ankyrin repeat family protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT2G31820 0.5kb upstream 0.5kb upstream 4083   true Chr2: 13529266-13533348
AT2G31820 0.5kb upstream 0.5kb upstream 500   false Chr2: 13529266-13529765
AT2G31820 0.5kb downstream 0.5kb downstream 4083   true Chr2: 13529766-13533848
AT2G31820 0.5kb downstream 0.5kb downstream 500   false Chr2: 13533349-13533848
AT2G31820 1.0kb upstream 1.0kb upstream 4583   true Chr2: 13528766-13533348
AT2G31820 1.0kb upstream 1.0kb upstream 1000   false Chr2: 13528766-13529765
AT2G31820 1.0kb downstream 1.0kb downstream 4583   true Chr2: 13529766-13534348
AT2G31820 1.0kb downstream 1.0kb downstream 1000   false Chr2: 13533349-13534348
AT2G31820 3.0kb upstream 3.0kb upstream 6583   true Chr2: 13526766-13533348
AT2G31820 3.0kb upstream 3.0kb upstream 3000   false Chr2: 13526766-13529765
AT2G31820 3.0kb downstream 3.0kb downstream 6583   true Chr2: 13529766-13536348
AT2G31820 3.0kb downstream 3.0kb downstream 3000   false Chr2: 13533349-13536348

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0