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Gene : scpl36 A. thaliana
Gene ID  ? AT3G52000
Brief Description  serine carboxypeptidase-like 36  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? serine carboxypeptidase-like 36 (scpl36); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 37 (TAIR:AT3G52010.1).  Source: TAIR, Jun 30, 2015.
Name  ? serine carboxypeptidase-like 36
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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G52000 0.5kb upstream 0.5kb upstream 2372   true Chr3: 19292510-19294881
AT3G52000 0.5kb upstream 0.5kb upstream 500   false Chr3: 19292510-19293009
AT3G52000 0.5kb downstream 0.5kb downstream 2372   true Chr3: 19293010-19295381
AT3G52000 0.5kb downstream 0.5kb downstream 500   false Chr3: 19294882-19295381
AT3G52000 1.0kb upstream 1.0kb upstream 2872   true Chr3: 19292010-19294881
AT3G52000 1.0kb upstream 1.0kb upstream 1000   false Chr3: 19292010-19293009
AT3G52000 1.0kb downstream 1.0kb downstream 2872   true Chr3: 19293010-19295881
AT3G52000 1.0kb downstream 1.0kb downstream 1000   false Chr3: 19294882-19295881
AT3G52000 3.0kb upstream 3.0kb upstream 4872   true Chr3: 19290010-19294881
AT3G52000 3.0kb upstream 3.0kb upstream 3000   false Chr3: 19290010-19293009
AT3G52000 3.0kb downstream 3.0kb downstream 4872   true Chr3: 19293010-19297881
AT3G52000 3.0kb downstream 3.0kb downstream 3000   false Chr3: 19294882-19297881

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Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from GOC GO annotations assigned by the GO Consortium 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
Swiss-Prot data set High-quality, manually annotated, non-redundant protein sequence database 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0
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